Search results

Question about pyscenic run time and memory usage, and potential updates to workflow?

Status: Open.

#130 In hbc/knowledgebase;

· liezeltamon opened on Jun 1, 2024

add a lesson on GEO submissions

category-researchquestions about analysis, how to do something in this particular casequestions about analysis, how to do something in this particular case

subcategory-general_ngsdocuments related to NGS technology but not to specific protocols already listeddocuments related to NGS technology but not to specific protocols already listed

Status: Open.

#104 In hbc/knowledgebase;

· mistrm82 opened on Jun 14, 2019

Reduce time for single cell markers visualization

category-researchquestions about analysis, how to do something in this particular casequestions about analysis, how to do something in this particular case

docsissues related to knowledgebase docsissues related to knowledgebase docs

subcategory-scrnaseqsingle cell RNAseq pipelinesingle cell RNAseq pipeline

Status: Open.

#93 In hbc/knowledgebase;

· lpantano opened on Mar 8, 2019

single cell materials - tutorials, templates and scripts

category-researchquestions about analysis, how to do something in this particular casequestions about analysis, how to do something in this particular case

subcategory-scrnaseqsingle cell RNAseq pipelinesingle cell RNAseq pipeline

Status: Open.

#73 In hbc/knowledgebase;

· marypiper opened on Oct 18, 2018

bcbio to STREAM

Status: Open.

#52 In hbc/knowledgebase;

· mjsteinbaugh opened on Aug 17, 2018

Installing a versioned bcbio release

Status: Open.

#51 In hbc/knowledgebase;

· mjsteinbaugh opened on Aug 16, 2018

How to get access to and download data from dbGap

docsissues related to knowledgebase docsissues related to knowledgebase docs

Status: Open.

#28 In hbc/knowledgebase;

· sjhosui opened on Aug 8, 2018

suggestion: useful references document

Status: Open.

#27 In hbc/knowledgebase;

· jnhutchinson opened on Aug 7, 2018

Example Cell Ranger load scripts

docsissues related to knowledgebase docsissues related to knowledgebase docs

subcategory-scrnaseqsingle cell RNAseq pipelinesingle cell RNAseq pipeline

urgentissues to solve as soon as possibleissues to solve as soon as possible

Status: Open.

#25 In hbc/knowledgebase;

· mjsteinbaugh opened on Aug 3, 2018

Arranging multidimensional data along a 2d curve

subcategory-rnaseqissues related to RNAseq pipelineissues related to RNAseq pipeline

subcategory-scrnaseqsingle cell RNAseq pipelinesingle cell RNAseq pipeline

Status: Open.

#23 In hbc/knowledgebase;

· roryk opened on Aug 3, 2018

Spacemacs (emacs/vim) setup

category-computingdocuments related to software administration, tools usage, tips and tricksdocuments related to software administration, tools usage, tips and tricks

subcategory-tips and tricksdocuments related to tips and tricks for codedocuments related to tips and tricks for code

Status: Open.

#22 In hbc/knowledgebase;

· roryk opened on Aug 3, 2018

Add genome usage information

category-researchquestions about analysis, how to do something in this particular casequestions about analysis, how to do something in this particular case

Status: Open.

#20 In hbc/knowledgebase;

· vbarrera opened on Aug 3, 2018