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Bug: Adding <code>feature_transforms</code> with the 'transform' value non None causes ASCII errors during training

bugSomething isn't workingSomething isn't working

Status: Open.

#653 In DeepRank/deeprank2;

· Norgent opened on Oct 17, 2025

No preclustering logic when loading pre-trained model for inference

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#652 In DeepRank/deeprank2;

· Norgent opened on Oct 1, 2025

Improvements to PyPi listing/pyproject.toml

docsImprovements or additions to documentationImprovements or additions to documentation

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#648 In DeepRank/deeprank2;

· DaniBodor opened on Jan 14, 2025

re-order <code>add_feature</code> arguments

covariatesmodules from the 'features' subpackagemodules from the 'features' subpackage

discDiscussion needed, to better define the task/sDiscussion needed, to better define the task/s

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#633 In DeepRank/deeprank2;

· DaniBodor opened on Jul 22, 2024

Add single proteins/molecules class

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#605 In DeepRank/deeprank2;

· gcroci2 opened on May 21, 2024

Provide the trained models for various scenarios.

featureNew feature to addNew feature to add

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#602 In DeepRank/deeprank2;

· amjjbonvin opened on Mar 22, 2024

Create a tutorial for the antibody-antigen docking models use case

blocked

Status: Open.

#556 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.4: Tutorials&Datasets

Create a tutorial for the protein-ligand complexes use case

blocked

Status: Open.

#555 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.4: Tutorials&Datasets

Add example data for antibody-antigen docking models use case

discDiscussion needed, to better define the task/sDiscussion needed, to better define the task/s

needs infomore information is neededmore information is needed

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#553 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.4: Tutorials&Datasets

Add example data for protein-ligand complexes use case

discDiscussion needed, to better define the task/sDiscussion needed, to better define the task/s

needs infomore information is neededmore information is needed

staleissue not touched from too much timeissue not touched from too much time

Status: Open.

#552 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.4: Tutorials&Datasets

Create tests and docs for multiple-chain graphs

blocked

Status: Open.

#551 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.3: Multiple-chains

Create tests and docs for protein-ligand graphs

blocked

Status: Open.

#550 In DeepRank/deeprank2;

· gcroci2 opened on Jan 15, 2024

·  

M1.2: Protein-ligands